Tuesday, June 16, 2020

Introduction to Common Instruments in the Laboratory

Introduction to Common Instruments in the Laboratory

Hot Air Oven

Sterilization and aseptic processing are essential practices in a microbiology laboratory. Hot air ovens are electrical devices which use dry heat to sterilize. They were originally developed by Pasteur. Dry heat sterilization is used on equipment that cannot be wet and on material that will not melt, catch fire, or change form when exposed to high temperatures. Dry heat takes more time to kill microorganisms than moist heat, but it has certain advantages such as it does not corrode glassware (petri dishes, flasks, pipettes, and test tubes), metal instruments and can be used to sterilize powders (starch, zinc oxide, and sulfadiazine), oils, liquid paraffin, fats, grease, etc.  Dry heat sterilization is slow and is not useful for heat sensitive materials such as plastic and rubber items. 

(i)                 Sterilizing by dry heat is accomplished by conduction. The heat is absorbed by the outside surface of the item, then passes towards the center of the item, layer by layer. The entire item will eventually reach the temperature required for sterilization to take place.

(ii)              Dry heat does most of the damage by oxidizing molecules. The essential cell constituents are destroyed and the organism dies. The temperature is maintained for almost an hour to kill the most difficult of the resistant spores.

(iii)            Hot air ovens use extremely high temperatures over several hours to destroy microorganisms and bacterial spores. Nowadays, ovens based on microwaves are also sold in the market but generally not much in use in the laboratory.

(iv)             The ovens generally consist of double chamber, the gap between the two walls is insulated to keep the heat in and conserve energy. There is double walled insulation with the inner layer being a poor conductor and outer layer being metallic. The oven is heated from below by using electric current and the heating elements are arranged in a manner to heat the inside of the chamber of uniformly.

(v)               The calibration knob sets the desired temperature. A thermostat controls the temperature which is displayed by the thermometer. An air circulating fan helps in uniform distribution of the heat. These are fitted with the adjustable wire mesh plated trays or aluminium trays and may have an on/off rocker switch, as well as indicators and controls for temperature and holding time.

(vi)             For sterilization, the holding time depends upon the temperature. If the temperature of the oven is 160oC, the holding time should be two hours. At, 180oC, it should be one hour. The holding time can be little more for better sterilization.

Precautions

The glass materials should be wiped and dried before keeping inside the chamber in the oven or else it may break. After the holding time is over, the glassware should not be taken out immediately. The oven must be allowed to cool down before the door is opened, since otherwise glassware may crack due to sudden or uneven cooling. The air within the oven, should be circulated by a fan to ensure uniform distribution of heat. The articles should be kept properly arranged so as not to obstruct the flow of the air.

Spores of nontoxigenic strain of Clostridium tetaniare used a microbiological test of dry heat efficiency.  Paper strips impregnated with 106spores are used, and after sterilization the spores are inoculated into appropriate media (thioglycollate or cooked meat media) and incubated to test for growth.

Autoclave

Moist heat sterilization uses water to boil items or steam them to sterilize and doesn't take as long as dry heat sterilization. Steam sterilization is carried out with an autoclave, a device like a pressure cooker. Chamberland, in 1884 developed the autoclave which played a crucial role in the growth of microbiology. Autoclave enables moist sterilization using steam in a closed system, very similar to the pressure boiling process. In microbiology laboratory, horizontal type autoclave is necessary.

Moist heat is thought to kill microorganisms and even spores effectively by degrading nucleic acids and by denaturing enzymes and other essential proteins.  It also may disrupt cell membranes.

(i)                 The autoclave is usually of pressure cooker type made up of gun metal sheets supported in an iron case. The sidewalls are heated by the steam jacket. It is closed by a swing door fastened tightly by radial belts.

(ii)              It is filled with water which is boiled at 100oC to accumulate steam in the the autoclave’s chamber.

(iii)            The air initially present in the chamber is forced out until the chamber is filled with saturated steam and the outlets are closed.

(iv)             Hot, saturated steam continues to enter until the chamber reaches the desired temperature and pressure, usually 121°C and 15 pounds of pressure. The pressur valve regulates pressure.

(v)               At this temperature, saturated steam destroys all vegetative cells and endospores in a small volume of liquid within 10 to 12 minutes. Treatment is continued for about 15 minutes to ensure sterility.

(vi)             The chamber should not be packed too tightly because the steam needs to circulate freely and contact everything in the autoclave.

(vii)          Bacterial endospores will be killed only if they are kept at 121°C for 10 to 12 minutes.

(viii)        When a large volume of liquid must be sterilized, an extended sterilization time will be needed because it will take longer for the center of the liquid to reach 121°C.

Precautions

The level of water should be checked before operating. The air should be completely evacuated and the steam must have access to the materials to be sterilized. Cotton or glass beads must be sterilized in a glass container closed with foil. The heat sensitive substances should not be sterilized by autoclaving. Checking of completion of autoclaving is possible with the use of indicator strips which change color after the required time interval at the proper conditions. 

For determining the efficiency of moist heat sterilization, spores of Bacillus stearothermophilus or Clostridium PA3679 is used as test.  The spores of this organism need an exposure of 12 minutes at 121oC to be killed. 

Incubator

            Abundant growth of microbes is obtained in the laboratory by growing them at suitable temperatures. This is done by inoculating the desired microbe into a suitable culture medium and then incubating it at the temperature optimum for its growth.

Incubator provides a constant temperature specifically suitable for the growth of a specific microbe. As most of the microbes pathogenic to man grow well at body temperature of normal human being (i.e. 37°C), the usual temperature of incubation is 37°C. The incubator has a thermostat, which maintains a constant temperature, set according to requirement. Accurate temperature can be seen on the thermometer fixed on the incubator.

Most of the modern incubators are programmable where the operator sets the desired temperature and the required period of time. The incubator automatically maintains it accordingly. Moisture is ensured to retard the dehydration of the media and thereby, avoid false experimental results.

(i)                 An incubator is made up of double walled chamber adjusted to a desired temperature. It is done by using an external knob controlling the thermostat system. The gap between two walls ensures heat conduction.

(ii)              There is provision for cold/warm water or air to be circulated as a jacket around the incubator to adjust the temperature. Now sophisticated incubators are available with humidity and oxygen control systems

(iii)            A thermometer is present for recording the temperature. The temperature of the incubator is kept constant due to its control by using thermostat.

(iv)             Temperature greatly influences the microbial growth. Therefore, the instrument is designed with controls to allow the desired temperature for growth of microorganisms.

(v)               The variation in temperature should not be generally more than one degree. The instrument should be accordingly calibrated.

(vi)             Small square type incubators are better than large ones. If a temperature lower than the room temperature is required, the water is circulated around the chamber to pass through an ice chest.

Precautions

            The door of the incubator should be opened only when necessary. If tubes are to be incubated for a long time or at higher temperatures, the medium may become dry due to excessive evaporation. In such cases, the cotton plug should be pushed inside the neck of the tube, The tube should be covered with a rubber cap so as to cover the plug. If petridishes are to be incubated for long time, they may be placed in the moist chamber with a damp sterile cotton wool at the bottom.

Laminar Air Flow Cabinet (Biological Safety Cabinets)

Laminar air hood provides aseptic/sterile conditions in a microbiology laboratory. It is one of the most important air filtration systems, with high-efficiency particulate air (HEPA) filters, which remove 99.97% of 0.3µm particles. Laminar air flow cabinets force air through HEPA filters and pass a curtain of sterile air across the cabinet opening. This protects a worker from microorganisms being handled within the cabinet and prevents contamination of the room. These cabinets are used when working with potentially pathogenic microorganisms. They are also employed in research labs and industries for conducting assays, preparing media, examining tissue cultures, etc. Laminar Flow Cabinets can be tailor made to the specific requirements of the laboratory and are also ideal for general lab work.

(i)                 Laminar air flows provide a clean air environment and maintain a working area devoid of contaminants. All the culture vessels, test tubes, pipette, tip boxes, stocks of sterile Eppendorfs should be opened only in the Laminar Air Flow. Culture Media should be poured inside the laminar air flow to avoid contamination and wrong results.

(ii)              Laminar air flow cabinets are normally made of stainless steel with no gaps or joints thereby preventing the build-up of bacteria from collecting anywhere in the working zone. They are also known as clean benches because the air for the working environment is thoroughly cleaned by the precise filtration process.

(iii)            A laminar flow chamber ensures sterility by several mechanisms.  The UV lamp fitted inside the chamber sterilizes the chamber before operation. Before use, the platform is cleaned and disinfected with alcohol. The UV light is switched on for 10 minutes to sterilize the environment inside the chamber and then switched off. The blower is switched on while working. HEPA filter provides dust free or microbe-free air. The inoculating area is sterilized by the flame of a bunsen burner. The heated air becomes light and moves upwards, thereby preventing the dust particles from falling on the media during the short opening process.

(iv)              Laminar flow cabinets can be either horizontal or vertical cabinets.

Horizontal Laminar Flow Cabinets – Here the direction of air is across the work in a horizontal direction. The constant flow of filtered air provides material and product protection.

Vertical Laminar Flow Cabinets -  Here the laminar the air blows down from the top of the cabinet onto the working area. The air can leave the working area via holes in the base, hence vertical flow cabinets can provide greater operator protection when working with potentially hazardous specimens.

 

Precautions

While using laminar air hood, sterilize the cabinet or the surface of the working area to avoid any kind of contamination. Wipe with ethanol before and after each use. Horizontal laminar air flow is designed such that the air flows directly at the operator. It is useful for tissue or cell culture work. Vertical Laminar air flow is best for working with microbiological specimens since the aerosols that are generated in the cabinet are filtered out before they are released into the surrounding environments. The glass door of the cabinet should never be opened when the UV light is on, because UV light has detrimental effect on skin and vision.

 



 


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